Y6 Publications: 4-1-13 to 3-31-14

Primary Publications:

Adeleye A.S. and Keller A.A. (2014) Long-term colloidal stability and metal leaching of single wall carbon nanotubes: Effect of temperature and extracellular polymeric substances. Water Research, 49, 236–250. Doi: 10.1016/j.watres.2013.11.032

Beaudrie C.E.H, Satterfield T., Kandlikar M., Harthorn B.H. (2013) Expert views on regulatory preparedness for managing risks of nanotechnology. PLOS One, 8(11): e80250. doi: 10.1371/journal.pone.0080250.

Beaudrie C.E.H., Kandlikar M., Satterfield T. (2013) From Cradle-to-Grave at the Nanoscale: Gaps in US Regulatory Oversight along the Nanomaterial Life Cycle. Environmental Science & Technology, 47 (11): 5524–5534. doi: 10.1021/es303591x

Chernyshova I.V., Ponnurangam S., Somasundaran, P. (2013) Linking interfacial chemistry of CO2 to surface structures of hydrated metal oxide nanoparticles: hematite. Physical Chemistry Chemical Physics, 15, 6953-6964. Doi:  10.1039/C3CP44264K

Chowdhury I., Duch M.C., Mansukhani N.D., Hersa, M.C., Bouchard D. (2013) Colloidal properties and stability of graphene oxide nanomaterials in the aquatic environment. Environ. Sci. Technol, 47, 6285-6296. Doi: 10.1021/es400483k

Chowdhury I., Duch M.C., Mansukhani N.D., Hersam M.C, Bourchard D. (2013) Deposition and release of graphene oxide nanomaterials using a quartz crystal microbalance. Environ. Sci. Technol, 48, 961-969. doi: 10.1021/es403247k

Conway J.R., Hanna S.K., Lenihan H.S., Keller A.A. (2014) Effects and implications of trophic transfer and accumulation of CeO2 nanoparticles in a marine mussel. Environ. Sci. Technol, 48, 1517-1524. Doi: 10.1021/es404549u

Engeman C.D., Baumgartner L., Carr B.M., Fish A.M., Meyerhofer J.D., Satterfield T.A., Holden P.A., Harthorn B.H. (2013) The Hierarchy of Environmental Health and Safety Practices in the U.S. Nanotechnology Workplace. Journal of Occupational and Environmental Hygiene 10(9): 487-495. Doi: 10.1080/15459624.2013.818231

Ge Y., Priester J.H., Van De Werfhorst L.C., Schimel J.P., Holden P.A. (2013) The potential mechanisms and environmental controls of TiO2 nanoparticle effects on soil bacterial communities. Environmental Science & Technology, 47, 14411−14417. doi: 10.1021/es403385c

Hanna S.K., Miller R.J., Zhou D., Keller A.A., Lenihan H.S. (2013) Accumulation and toxicity of metal oxide nanoparticles in a soft-sediment estuarine amphipod. Aquatic Toxicology, 142–143, 441–446. doi: 10.1016/j.aquatox.2013.09.019

Hanna S.K., Miller R.J, Muller E.B., Nisbet R.M, Lenihan H.S. (2013)  Impact of Zinc Oxide nanoparticles on the individual performance of Mytilus galloprovincialis. PLoS ONE 8(4): e61800.  doi: 10.1371/journal.pone.0061800.

Harper S.L., Hutchison J.E., Baker N., Ostraat M., Tinkle S., Steevens J., Hoover M.D., Adamick J., Rajan K., Gaheen S., Cohen Y., Nel A.E., Cachau R.E., Tuonminen M. (2013)  Nanoinformatics workshop report: current resources, community needs and the proposal of a collaborative framework for data sharing and information integration. Computational Science & Discovery, (6): 014008. doi: 10.1088/1749-4699/6/1/014008

Holden P.A., Nisbet R.M., Lenihan H.S., Miller R.J., Cherr G.N., Schimel J.P., Gardea-Torresdey J.L. (2013) Ecological nanotoxicology: integrating nanomaterial hazard considerations across the subcellular, population, community, and ecosystems levels. Accounts of Chemical Research, 46(3):813–822. doi: 10.1021/ar300069t

Holden P.A., Schimel J.P., Godwin H.A. (2013) Five reasons to use bacteria when assessing manufactured nanomaterial hazards and fates. Current Opinion in Biotechnology, 27,73–78. doi: 10.1016/j.copbio.2013.11.008

Hung A. H. ; Duch M.C., Parigi G., Rotz M.W., Manus L.M, Mastarone D.J., Dam K.T., Gits C.C., MacRenaris K.W., Luchinat C. Hersam M.C., Meade, T.J. (2013) Mechanisms of gadographene-mediated proton spin relaxation. Journal of Phys. Chem. C, 117, 16263−16273. Doi: 10.1021/jp406909b

Ivask A., ElBadawy A., Kaweeteerawat C., Boren D., Fischer H., Ji Z., Chang C.H., Liu R., Tolaymat T., Telesca D., Zink J.I., Cohen Y.C., Holden P., Godwin H. (2013) Toxicity Mechanisms in Escherichia coli Vary for Silver Nanoparticles and Differ from Ionic Silver. ACS Nano, 8(1): 374-386. doi: 10.1021/nn4044047

Jarvis T., Miller R.J., Lenihan H.S., Bielmyer G.K. (2013) Toxicity of ZnO nanoparticles to the copepod, Acartia tonsa, exposed through a phytoplankton diet. Environmental Toxicology and Chemistry, 32(6): 1264-1269. doi: 10.1002/etc.2180

Keller A.A. and Lazareva A. (2014) Predicted releases of engineered nanomaterials: from global to regional to local. Environ. Sci. Tech. Letters, 1, 65−70. Doi:  10.1021/ez400106t.

Keller A.A., McFerran S., Lazareva A. and Suh S. (2013) Global life-cycle emissions of engineered nanomaterials. J. Nanoparticle Research, (15), 1692. Doi: 10.1007/s11051-013-1692-4

Lanphere J.D., Luth C.J. and Walker S.L. (2013a) Effects of Solution Chemistry on the Transport of Graphene Oxide in Saturated Porous Media. Environ Sci Technol 47(9): 4255–4261. Doi: 10.1021/es400138c

Li R., Ji Z., Chang C.H., Dunphy D., Cai X., Meng H., Zhang H. Sun B., Wang X., Dong J., Lin S., Wang M., Liao Y., Brinker C.J., Nel A.E., Xia T.  (2014) Surface interactions with compartmentalized cellular phosphates explains rare earth oxide nanoparticle hazard and provides opportunities for safer design. ACS Nano, 8(2):1771-1783. Doi: 10.1021/nn406166n

Li R., Wang X., Ji Z., Sun B., Zhang H., Chang C.H., Lin S., Meng H., Liao Y.P., Wang M., L, Z., Hwang A.A., Song T.B., Xu R., Yang Y., Zink J.I., Nel A.E., Xia T. (2013) Surface Charge and Cellular Processing of Covalently Functionalized Multiwall Carbon Nanotubes Determine Pulmonary Toxicity. ACS Nano, 7(3): 2352-2368. doi: 10.1021/nn305567s

Liu H.H, Cohen Y. (2014) Multimedia Environmental Distribution of Engineered Nanomaterials, Environmental Science & Technology. Online ahead of publication. doi: 10.1021/es405132z

Liu R., Rallo R., Shaw S., Cohen Y.C. (2013) Nano-SAR Development for Bioactivity of Nanoparticles with Considerations of Applicability Domain and Decision Boundaries. Small, 9, 1842-1852. doi: 10.1002/smll.201201903

Liu R., France B., George S., Rallo R., Zhang H., Xia T., Nel A.E., Bradley K., Cohen Y.C. (2013) Regulatory Association Rule Mining of Cellular Responses Induced by Metal and Metal Oxide Nanoparticles. Analyst, 139, 943–953. doi: 10.1039/C3AN01409F

Liu R., Zhang H., Ji Z., Rallo R., Xia T., Chang C.H., Nel A.E., Cohen Y. (2013) Development of Structure-Activity Relationship for Metal Oxide Nanoparticles. Nanoscale, 5, 5644-53. doi: 10.1039/C3NR01533E

Liu R., Hassan T., Rallo R., Cohen Y. (2013) HDAT: Web-based High-Throughput Screening Data Analysis Tools. Computational Science & Discovery, 6: 014006. doi: 10.1088/1749-4699/6/1/014006

Mielke R.E., Priester J.H., Werlin R.A., Gelb J., Horst A.M., Orias E., Holden P.A. (2013) Differential growth of and nanoscale TiO2 accumulation in Tetrahymena thermophila by direct feeding versus trophic transfer from Pseudomonas aeruginosa. Applied and Environmental Microbiology, 79, 5616-5624. doi: 10.1128/AEM.01680-13

Morales M.I., Rico C.M., Hernandez-Viezcas J.A., Nunez J.E., Barrios A.C., Tafoya A., Flores-Marges J.P., Peralta-Videa J.R., Gardea-Torresdey J.L. (2013) Toxicity assessment of cerium oxide nanoparticles in cilantro (Coriandrum sativum L.) plants grown in organic soil. Journal of Agricultural and Food Chemistry, 61, 6224-6230. doi: 10.1021/jf401628v

Muller E.B., Ananthasubramaniam B., Klanjscek T.,  Nisbet R.M. (2013)  Entrainments of Cell Division in Phytoplankton with Dynamic Energy Budgets. Journal of Sea Research, 66, 447–455. doi: 10.1016/j.seares.2011.04.004

Muller E.B., Hanna S.K., Lenihan H.S., Miller R.J, Nisbet R.M. (2013) Impact of engineered zinc oxide nanoparticles on the energy budgets of Mytilus galloprovincialisJournal of Sea Research. Online ahead of publication. doi: 10.1016/j.seares.2013.12.013

Nel A.E; et. al. (2013) A Multi-Stakeholder Perspective on the Use of Alternative Test Strategies for Nanomaterial Safety Assessment. ACS Nano, 7(8): 6422-33. doi: 10.1021/nn4037927

Nel A.E.; Malloy T., Avery D., Nasser E., Beryt E. (2013) Implications of the French Registry for Engineered Nanomaterials (Editorial). ACS Nano, 7(6): 4694–4696. doi: 10.1021/nn402619s

Patel T., Low-Kam C., Ji Z.X., Zhang H.Y., Nel A.E., Xia T., Zink J.I., Telesca D.  (2013) Relating Nanoparticle Properties to Biological Outcomes in Exposure Escalation Experiments. Environmetrics. doi: 10.1002/env.2246

Patel T., Telesca D., Rallo R., George S., Xia T. and Nel A.E. (2014) Hierarchical Rank Aggregation with Applications to NanotoxicologyJABES, 18 (2): 159 – 177.  doi: 10.1007/s13253-013-0129-y

Priester, JH, Ge Y, Chang V, Stoimenov PK, Schimel JP, Stucky GD, Holden PA (2013) Assessing interactions of hydrophilic nanoscale TiO2 with soil water. Journal of Nanoparticle Research, 15, 1-13. doi: 10.1007/s11051-013-1899-4

Priester JH, Singhal A, Stucky GD, Holden PA (2013) Integrated approach to evaluating the toxicity of novel cysteine coated silver nanoparticles to Escherichia coli and Pseudomonas aeruginosa. Royal Society of Chemistry, 139, 954–963. doi: 10.1039/C3AN01648J

Rico CM, Morales MI, McCreary R, Castillo-Michel H, Barrios AC, Hong J, Tafoya A, Lee W-Y, Varela-Ramirez A, Peralta-Videa JR, et al. (2013) Cerium oxide nanoparticles modify the antioxidative stress enzyme activities and macromolecule composition in rice seedlings. Environmental Science & Technology, 47, 14110−14118. doi: 10.1021/es4033887

Rico CM, Hong J, Morales MI, Zhao LJ, Barrios AC, Zhang JY, Peralta-Videa JR, Gardea-Torresdey JL (2013) Effect of cerium oxide nanoparticles on rice: a study involving the antioxidant defense system and in vivo fluorescence imaging. Environmental Science & Technology, 47, 5635-5642. doi: 10.1021/es401032m

Trujillo-Reyes J, Vilchis-Nestor AR, Majumdar S, Peralta-Videa JR, Gardea-Torresdey JL (2013) Citric acid modifies surface properties of commercial CeO2 nanoparticles reducing their toxicity and cerium uptake in radish (Raphanus sativus) seedlings. Journal of Hazardous Materials, 263, 677–684. doi: 10.1016/j.jhazmat.2013.10.030

Stevenson L., Dickson H., Klanjscez T, Keller A.A., McCauley E., Nisbet R.M. (2013) Environmental feedbacks and engineered nanoparticles: mitigation of silver nanoparticle toxicity to Chlamydomonas reinhardtii by algal-produced organic compounds. PLoS ONE 8(9): e74456. doi:10.1371/journal.pone.0074456

Sun B. ; Wang X., Ji Z., Li R., Xia T. (2013) Nlrp3 Inflammasome Activation Induced by Engineered Nanomaterials. Small, 9, 1595-607. doi: 10.1002/smll.201201962

Sun B., Ji Z., Liao Y.P., Wang M., Wang X., Dong J., Chang C.H., Li R., Nel A.E., Xia T. (2013) Engineering an Effective Immune Adjuvant by Designed Control of Shape and Crystallinity of Aluminum Oxyhydroxide Nanoparticles.  ACS Nano, 7(12): 10834-10849. doi: 10.1021/nn404211j

Sun B., Li R., Wang X., Xia T. (2013) Predictive Toxicological Paradigm and High Throughput Approach for Toxicity Screening of Engineered Nanomaterials. International Journal of Biomedical Nanoscience and Nanotechnology, 3, 4-18. doi: 10.1504/IJBNN.2013.054506

Surawanvijit S., Kim M., Cohen Y.C. (2013) Removal of Metal Oxide Nanoparticles from Aqueous Suspensions. Separation Science and Technology, 49(2).  doi: 10.1080/01496395.2013.845850

Tarn D.; Ashley C. E.; Xue M.; Carnes E. C.; Zink J. I.; Brinker C. J. (2013) Mesoporous Silica Nanoparticle Nanocarriers: Biofunctionality and BiocompatibilityAccounts of Chemical Research, 46, 792-801. Doi: 10.1021/ar3000986

Tarn D., Xue M., Zink J.I. (2013) pH-Responsive Dual Cargo Delivery from Mesoporous Silica Nanoparticles with a Metal-Latched Nanogate, Inorganic Chemistry, 52(4): 2044-2049. Doi: 10.1021/ic3024265

Walkey C., Olsen J., Song F., Liu R., Guo H., Olsen W., Cohen Y.C., Chan W. (2014) Protein Corona Fingerprinting Predicts the Cell Association of Gold Nanoparticles. ACS Nano. Online ahead of publication. doi: 10.1021/nn406018q

Zhang H, et. al. (2014) PdO-doping Tunes Bandgap Energy Levels as well as Oxidative Stress Responses to a p-type Semiconductor Co3O4 in vitro and in vivo. Journal of the American Chemical Society. doi:10.1021/ja501699 

Zhao L., Peralta-Videa J.R., Peng B., Bandyopadhyay S., Corral-Diaz B., Keller A.A., Gardea-Torresdey J.L. (2014) Alginate modifies the physiological impact of CeO2 nanoparticles in corn seedlings cultivated in soil. Journal of Environmental Science. 26, 382–389. doi: 10.1016/S1001-0742(13)60559-8


Leveraged Publications:

Anderson C.W.N., Bhatti S.M., Gardea-Torresdey J., Parsons J. (2013) In vivo effect of copper and silver on synthesis of gold nanoparticles inside living plants. ACS Sustainable Chemistry & Engineering, 1 (6):640-648. doi:10.1021/sc400011s.

Brinker C. J.; Clem P. G. (2013) Quartz on SiliconScience, 340, 818-819. Doi:  10.1126/science.1236752

Chou S.S.; Kaehr B.; Kim J.; Foley B.M.; De M.; Hopkins P.E.; Huang J.; Brinker C.J.; Dravid V.P. (2013) Chemically Exfoliated Mos2 as near-Infrared Photothermal AgentsAngewandte Chemie International Edition, 52, 4160-4164. Doi: 10.1002/anie.201209229

Dengler E. C., Liu J., Kerwin A., Torres S., Olcott C. M., Bowman B. N., Armijo L., Gentry K., Wilkerson J., Wallace J., Jiang X., Carnes E. C., Brinker C. J., Milligan E. D. (2013) Mesoporous silica-supported lipid bilayers (protocells) for DNA cargo delivery to the spinal cordJournal of Controlled Release, 168, 209-224 (Cover) Doi: 10.1016/j.jconrel.2013.03.009

Dong J., Xue M., Zink J.I. (2013) Functioning of nanovalves on polymer coated mesoporous silica Nanoparticles. Nanoscale, 5(21), 10300-10306. Doi:10.1039/c3nr03442a

Guardado-Alvarez T.M., Sudha D. L., Russell M.M., Schwartz, B.J., Zink J.I. (2013) Activation of Snap-Top Capped Mesoporous Silica Nanocontainers Using Two Near-Infrared Photons. Journal of the American Chemical Society, 135(38), 14000-14003. doi:10.1021/ja407331n

Jiang S., Cheng R., Wang X., Xue T., Liu Y., Nel A.E., Huang Y., Duan X. (2013) Real-Time Electrical Detection of Nitric Oxide in Biological Systems with Sub-Nanomolar SensitivityNat Commun, 4, 2225.  doi: 10.1038/ncomms3225

Kemmler J. A., Pokhrel S., Mädler L., Weimar U., Barsan, N. (2013) Flame spray pyrolysis for sensing at the nanoscale. Nanotechnology, 24, 442001. doi: 10.1088/0957-4484/24/44/442001

Meng H., Mai W.X., Zhang H., Xue M., Xia T., Lin S., Wang X., Zhao Y, Ji Z., Zink J.I., Nel A.E. (2013) Codelivery of an Optimal Drug/Sirna Combination Using Mesoporous Silica Nanoparticles to Overcome Drug Resistance in Breast Cancer in Vitro and in Vivo. ACS Nano, 7, 994-1005. doi: 10.1021/nn3044066

Meng H., Zhang Y., Dong J., Xue M., Lin Y.S., Ji Z., Mai W., Zhang H., Chang C.H., Dong J., Brinker C.J. (2013) Two-Wave Nanotherapy To Target the Stroma and Optimize Gemcitabine Delivery To a Human Pancreatic Cancer Model in Mice. ACS Nano, 7(11), 10048-10065. DOI:10.1021/nn404083m

Minnermann M., Grossman H.K., Pokhrel S., Thiel K., Hagelin-Weaver H., Baumer M., Madler L. (2013) Double flame spray pyrolysis as a novel technique to synthesize alumina-supported cobalt Fischer-Tropsch catalysts. Catalysis Today, 214, 90–99. Doi: 10.1016/j.cattod.2013.04.001

Möller W., Gibson N., Geiser M., Pokhrel S., Wenk A., Tanaka S., Schmid O., Bulgheroni A., Simonelli F., Kozempel J., Holzwarth U., Wigge C., Eigeldinger-Berthou S., Madler L., Kreyling W.G. (2013) Gold nanoparticles aerosols for rodent inhalation and translocation studies. J. Nanoparticle Res., 15(4), 1574-1583. Doi: 10.1007/s11051-013-1574-9

Parsons J., Dokken K., McClure J., Gardea-Torresdey J.L. (2013) FTIR, XAS, and XRD study of cadmium complexes with L-Cysteine. Polyhedron, 56, 237–242. doi: 10.1016/j.poly.2013.04.001

Sun Y., Niu G., Osuna P., Ganjegunte G., Auld D., Zhao L., Peralta-Videa J.R., Gardea-Torresdey J.L. (2013) Seedling emergence and growth of Ricinus communis L. cultivars irrigated with saline solution. Industrial Crops and Products, 49,75–80.  doi: 10.1016/j.indcrop.2013.04.025

Wang X., Ji Z., Chang C.H., Zhang H., Wang M., Liao Y.P, Lin S., Meng H., Li, R., Sun R., Van Winkle, L., Pinkerton K.E., Zink J.I., Xia T, Nel A.E. (2013) Use of Coated Silver Nanoparticles to Understand the Relationship of Particle Dissolution and Bioavailability to Cell and Lung Toxicological Potential. Small, 10, 2, 385–398. doi: 10.1002/smll.201301597

Wang Z., Pokhrel S., Chen M., Hunger M., Madler L., Huang, J. (2013) Palladium-doped silica–alumina catalysts obtained from double-ï¬ï¿½ame FSP for chemoselective hydrogenation of the model aromatic ketone acetophenone. J. Catal., 302, 10-19. Doi: 10.1016/j.jcat.2013.02.017

Xia T., Hamilton R.F., Bonner J.C., Crandall E.D., Elder A., Fazlollahi F., Girtsman T.A., Kim K., Mitra S., Ntim S.A., Orr G., Tagmount M., Taylor A.J., Telesca D., Tolic A., Vulpe C.D., Walker A.J., Wang X., Witzhmann F.A., Wu N., Xie Y., Zink J.I, Nel, A.E., Holian A. (2013)  Interlaboratory Evaluation of in Vitro Cytotoxicity and Inflammatory Responses to Engineered Nanomaterials: The Niehs Nano Go ConsortiumEnviron Health Perspect, 121, 683-90. doi: 10.1289/ehp.1306561

Xiao J, Kuc A, Pokhrel S, Mädler L, Pöttgen R, Winter F, Frauenheim T, Heine T (2013). Fe-Doped ZnO nanoparticles: The oxidation number and local charge on iron, studied by 57Fe Mössbauer spectroscopy and DFT calculations. Chem. Eur. J. 19(10), 3287-3291. Doi: 10.1002/chem.201204308

Xiong S., Dunphy D.R., Wilkinson D.C., Jiang Z., Strzalka J., Wang J., Su Y., de Pablo J.J., Brinker C.J. (2013) Revealing the Interfacial Self-Assembly Pathway of Large-Scale, Highly-Ordered, Nanoparticle/Polymer Monolayer Arrays at an Air/Water InterfaceNano Letters.  13, 1041-1046. Doi: 10.1021/nl304253y

Zappala M.N., Ellzey J.T., Bader J., Peralta-Videa J.R., Gardea- Torresdey J.L. (2013) Effects of copper sulfate on seedlings of Prosopis pubescens (screwbean mesquite). Int J Phytoremediation, 16(10). doi: 10.1080/15226514.2013.810582

Zappala M.N., Ellzey J.T., Bader J., Peralta-Videa J.R., Gardea-Torresdey J.L. (2013) Prosopis pubescens (screw bean mesquite) seedlings are hyperaccumulators of copper. Arch Environ Contam Toxicol 65 (2):212-223. doi: 10.1007/s00244-013-9904-6


Books/Chapters/Other Publications:

Collins M., Freudenburg W. (2013). Temporal Myopia: A Case of Promising New Technologies, the Federal Government, and Inherent Conflicts of Interest. Research in Social Problems and Public Policy ed. Susan Maret. (Primary) ISBN: 978-1-78190-734-4. doi:10.1108/S0196-1152(2013)0000021016

Gardea-Torresdey J.L., Andrews J.C., Hernandez-Viezcas J.A. (2013). Tracing nanoparticle transformations in soybean plants. In SSRL Highlights Newsletter; 2013:1-3. http://www-ssrl.slac.stanford.edu/research/enpuptake_soybean.html 

Hong J., Peralta-Videa J.R., Gardea-Torresdey J.L. (2013) Nanomaterials in agricultural production: benefits and possible threats? In Sustainable Nanotechnology and the Environment: Advances and Achievements (eds. N. Shamim, V.K. Sharma). 73-90. doi: 10.1021/bk-2013-1124.ch005  

Liu R., Rallo R., Cohen Y.C. (2013). Quantitative Structure-Activity- Relationships for Cellular Uptake of Nanoparticles. Proceedings of the 13th IEEE International Conference on Nanotechnology, 154-157.

Low-Kam C., Ji Z.X., Zhang H.Y., Nel A.E., Xia T., Zink J.I., Telesca D. (2013)  A Bayesian Regression Tree Approach to Identify the Effect of Nanoparticle Properties on Toxicity Profiles. COBRA Preprint Series. Paper 102. http://biostats.bepress.com/cobra/art102.